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AHPubMedDbs

This is the released version of AHPubMedDbs; for the devel version, see AHPubMedDbs.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13

SQLites, tibbles, and data.tables for AnnotationHub

DOI: 10.18129/B9.bioc.AHPubMedDbs

Bioconductor version: Release (3.23)

Supplies AnnotationHub with some preprocessed sqlite, tibble, and data.table datasets of PubMed. All the datasets are generated by our Snakemake workflow [pubmed-workflow](https://github.com/rikenbit/pubmed-workflow). For the details, see the README.md of pubmed-workflow.

Author: Koki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut]

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("AHPubMedDbs")):

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido. AHPubMedDbs: SQLites, tibbles, and data.tables for AnnotationHub. doi:10.18129/B9.bioc.AHPubMedDbs, R package version 1.8.0, https://bioconductor.org/packages/AHPubMedDbs.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AHPubMedDbs")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AHPubMedDbs")

Details

Package Archives

Follow Installation instructions to use this package in your R session.