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AgiMicroRna

This is the released version of AgiMicroRna; for the devel version, see AgiMicroRna.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Processing and Differential Expression Analysis of Agilent microRNA chips


Bioconductor version: Release (3.23)

Processing and Analysis of Agilent microRNA data

Author: Pedro Lopez-Romero <plopez at cnic.es>

Maintainer: Pedro Lopez-Romero <plopez at cnic.es>

Citation (from within R, enter citation("AgiMicroRna")):

Pedro Lopez-Romero. AgiMicroRna: Processing and Differential Expression Analysis of Agilent microRNA chips. doi:10.18129/B9.bioc.AgiMicroRna, R package version 2.62.0, https://bioconductor.org/packages/AgiMicroRna.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AgiMicroRna")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AgiMicroRna")
AgiMicroRna PDF R Script
Reference ManualPDF

Details

biocViews AgilentChip, DifferentialExpression, Microarray, OneChannel, Preprocessing, Software
Version2.62.0
In Bioconductor sinceBioC 2.5 (R-2.10) (17 years)
License GPL-3
Depends R (>= 2.10), methods, Biobase, limma, affy (>= 1.22), preprocessCore, affycoretools
Imports Biobase
System Requirements
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Suggests geneplotter, marray, gplots, gtools, gdata, codelink
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AgiMicroRna_2.62.0.tar.gz
Windows Binary (x86_64) AgiMicroRna_2.62.0.zip
macOS Binary (big-sur-x86_64) AgiMicroRna_2.62.0.tgz
macOS Binary (sonoma-arm64) AgiMicroRna_2.62.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/AgiMicroRna
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/AgiMicroRna
Package Short Url https://bioconductor.org/packages/AgiMicroRna/
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