ExperimentHubData

This is the released version of ExperimentHubData; for the devel version, see ExperimentHubData.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4

Add resources to ExperimentHub

Bioconductor version: Release (3.23)

Functions to add metadata to ExperimentHub db and resource files to AWS S3 buckets.

Author: Bioconductor Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("ExperimentHubData")):

Bioconductor Maintainer. ExperimentHubData: Add resources to ExperimentHub. doi:10.18129/B9.bioc.ExperimentHubData, R package version 1.38.0, https://bioconductor.org/packages/ExperimentHubData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ExperimentHubData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ExperimentHubData")

Introduction to ExperimentHubData	HTML
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	DataImport, GUI, Infrastructure, Software, ThirdPartyClient
Version	1.38.0
In Bioconductor since	BioC 3.4 (R-3.3) (10 years)
License	Artistic-2.0
Depends	utils, BiocGenerics (>= 0.15.10), S4Vectors, AnnotationHubData (>= 1.21.3)
Imports	methods, ExperimentHub, BiocManager, DBI, httr, curl
System Requirements
URL

Suggests	GenomeInfoDb, RUnit, knitr, BiocStyle, rmarkdown, HubPub
Linking To
Enhances
Depends On Me	RNAmodR.Data
Imports Me	methylclockData
Suggests Me	cfToolsData, DMRsegaldata, HubPub, humanHippocampus2024, JohnsonKinaseData, marinerData, MsDataHub, scMultiome, smokingMouse, TENET.ExperimentHub
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ExperimentHubData_1.38.0.tar.gz
Windows Binary (x86_64)	ExperimentHubData_1.38.0.zip
macOS Binary (big-sur-x86_64)	ExperimentHubData_1.38.0.tgz
macOS Binary (sonoma-arm64)	ExperimentHubData_1.38.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ExperimentHubData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ExperimentHubData
Package Short Url	https://bioconductor.org/packages/ExperimentHubData/
Package Downloads Report	Download Stats