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GENIE3

This is the released version of GENIE3; for the devel version, see GENIE3.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

GEne Network Inference with Ensemble of trees

DOI: 10.18129/B9.bioc.GENIE3

Bioconductor version: Release (3.23)

This package implements the GENIE3 algorithm for inferring gene regulatory networks from expression data.

Author: Van Anh Huynh-Thu, Sara Aibar, Pierre Geurts

Maintainer: Van Anh Huynh-Thu <vahuynh at uliege.be>

Citation (from within R, enter citation("GENIE3")):

Van Anh Huynh-Thu, Sara Aibar, Pierre Geurts. GENIE3: GEne Network Inference with Ensemble of trees. doi:10.18129/B9.bioc.GENIE3, R package version 1.34.0, https://bioconductor.org/packages/GENIE3.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GENIE3")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GENIE3")

Details

Package Archives

Follow Installation instructions to use this package in your R session.