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ModCon

This is the released version of ModCon; for the devel version, see ModCon.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13

Modifying splice site usage by changing the mRNP code, while maintaining the genetic code

DOI: 10.18129/B9.bioc.ModCon

Bioconductor version: Release (3.23)

Collection of functions to calculate a nucleotide sequence surrounding for splice donors sites to either activate or repress donor usage. The proposed alternative nucleotide sequence encodes the same amino acid and could be applied e.g. in reporter systems to silence or activate cryptic splice donor sites.

Author: Johannes Ptok [aut, cre] ORCID: 0000-0002-0322-5649

Maintainer: Johannes Ptok <Johannes.Ptok at posteo.de>

Citation (from within R, enter citation("ModCon")):

Johannes Ptok. ModCon: Modifying splice site usage by changing the mRNP code, while maintaining the genetic code. doi:10.18129/B9.bioc.ModCon, R package version 1.20.0, https://bioconductor.org/packages/ModCon.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ModCon")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ModCon")

Details

Package Archives

Follow Installation instructions to use this package in your R session.