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RTCA

This is the released version of RTCA; for the devel version, see RTCA.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Open-source toolkit to analyse data from xCELLigence System (RTCA)


Bioconductor version: Release (3.23)

Import, analyze and visualize data from Roche(R) xCELLigence RTCA systems. The package imports real-time cell electrical impedance data into R. As an alternative to commercial software shipped along the system, the Bioconductor package RTCA provides several unique transformation (normalization) strategies and various visualization tools.

Author: Jitao David Zhang

Maintainer: Jitao David Zhang <davidvonpku at gmail.com>

Citation (from within R, enter citation("RTCA")):

Jitao David Zhang. RTCA: Open-source toolkit to analyse data from xCELLigence System (RTCA). doi:10.18129/B9.bioc.RTCA, R package version 1.64.0, https://bioconductor.org/packages/RTCA.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RTCA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCA")
Introduction to Data Analysis of the Roche xCELLigence System with RTCA Package PDF R Script
RTCAtransformation: Discussion of transformation methods of RTCA data PDF R Script
Reference ManualPDF

Details

biocViews CellBasedAssays, ImmunoOncology, Infrastructure, Software, TimeCourse, Visualization
Version1.64.0
In Bioconductor sinceBioC 2.5 (R-2.10) (17 years)
License LGPL-3
Depends methods, stats, graphics, Biobase, RColorBrewer, gtools
Imports
System Requirements
URLhttp://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RTCA_1.64.0.tar.gz
Windows Binary (x86_64) RTCA_1.64.0.zip
macOS Binary (big-sur-x86_64) RTCA_1.64.0.tgz
macOS Binary (sonoma-arm64) RTCA_1.64.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/RTCA
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/RTCA
Package Short Url https://bioconductor.org/packages/RTCA/
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