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SLqPCR

This is the released version of SLqPCR; for the devel version, see SLqPCR.

Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH


Bioconductor version: Release (3.23)

Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH

Author: Matthias Kohl

Maintainer: Matthias Kohl <kohl at sirs-lab.com>

Citation (from within R, enter citation("SLqPCR")):
Seminal Bioconductor project articles:

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SLqPCR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SLqPCR")
SLqPCR PDF R Script
Reference Manual PDF

Details

biocViews MicrotitrePlateAssay, Software, qPCR
Version 1.78.0
In Bioconductor since BioC 2.0 (R-2.5) (19.5 years)
License GPL (>= 2)
Depends R (>= 2.4.0)
Imports stats
System Requirements
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Suggests RColorBrewer
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SLqPCR_1.78.0.tar.gz
Windows Binary (x86_64) SLqPCR_1.78.0.zip
macOS Binary (big-sur-x86_64) SLqPCR_1.78.0.tgz
macOS Binary (sonoma-arm64) SLqPCR_1.78.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SLqPCR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SLqPCR
Bioc Package Browser https://code.bioconductor.org/browse/SLqPCR/
Package Short Url https://bioconductor.org/packages/SLqPCR/
Package Downloads Report Download Stats