Singular Value Decomposition for Bioconductor Packages

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Documentation for package ‘BiocSingular’ version 1.25.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

BiocSingular-options	Global SVD options
BiocSingularParam-class	BiocSingularParam classes
bsdeferred	BiocSingularParam classes
bsfold	BiocSingularParam classes
bsparam	BiocSingularParam classes
DeferredMatrix	The DeferredMatrix class
DeferredMatrixSeed	The DeferredMatrix class
DelayedArray-method	The LowRankMatrix class
dim-method	The LowRankMatrix class
dimnames-method	The LowRankMatrix class
dimnames<--method	The LowRankMatrix class
ExactParam	BiocSingularParam classes
ExactParam-class	BiocSingularParam classes
extract_array-method	The LowRankMatrix class
FastAutoParam	BiocSingularParam classes
FastAutoParam-class	BiocSingularParam classes
IrlbaParam	BiocSingularParam classes
IrlbaParam-class	BiocSingularParam classes
LowRankMatrix	The LowRankMatrix class
LowRankMatrix-class	The LowRankMatrix class
LowRankMatrixSeed	The LowRankMatrix class
LowRankMatrixSeed-class	The LowRankMatrix class
RandomParam	BiocSingularParam classes
RandomParam-class	BiocSingularParam classes
ResidualMatrix	The ResidualMatrix class
ResidualMatrixSeed	The ResidualMatrix class
runExactSVD	Exact SVD
runIrlbaSVD	Approximate SVD with 'irlba'
runPCA	Principal components analysis
runPCA-method	Principal components analysis
runRandomSVD	Approximate SVD with 'rsvd'
runSVD	Run SVD
runSVD-method	Run SVD
show-method	BiocSingularParam classes
show-method	The LowRankMatrix class
t-method	The LowRankMatrix class
[-method	The LowRankMatrix class