| binScore | binScore |
| calcFreqs | calcFreqs |
| checkPairing | checkPairing |
| correlationSelection | correlationSelection: A vector correlation function calculator |
| lhCreateMAE | lhCreateMAE: Create a MultiAssayExperiment with Methylation and Expression Data |
| matCorrs | A row-wise correlation function calculator |
| messageTitle | messageTitle |
| numScore | numScore |
| plotGeneByName | plotGeneByName |
| plotGeneSel | plotGeneSel |
| plotGenesMat | plotGenesMat |
| scoreGenesMat | scoreGenesMat |
| TCGAexpression | Expression data matrix obtained from TCGA, TCGA-COAD dataset |
| TCGAmethylation | Methylation data matrix obtained from TCGA, TCGA-COAD dataset |
| toReqMat | toReqMat |