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BiocAzul

Programmatic Access to the Azul API

Bioconductor version: 3.24 · Package version: 1.1.3

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Represents the OpenAPI v2 Azul API as an R object for performing requests. The infrastructure uses the AnVIL and rapiclient packages. Users can connect to either the AnVIL or Human Cell Atlas Data Explorers.

DOI: 10.18129/B9.bioc.BiocAzul

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocAzul")

Details

MaintainerMarcel Ramos <marcel.ramos@sph.cuny.edu>
AuthorMarcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), NHGRI AnVIL Project [fnd] (GrantNo.: U24HG010263)
LicenseArtistic-2.0
URLhttps://github.com/Bioconductor/BiocAzul
Bug Reportshttps://github.com/Bioconductor/BiocAzul/issues
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsDataImport, Infrastructure, Software, ThirdPartyClient
Package Short Url https://bioconductor.org/packages/BiocAzul/

Citation

From within R, enter citation("BiocAzul"):

Marcel Ramos. BiocAzul: Programmatic Access to the Azul API. doi:10.18129/B9.bioc.BiocAzul, R package version 1.1.3, https://bioconductor.org/packages/BiocAzul.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageBiocAzul_1.1.3.tar.gz
Windows binary (x86_64)BiocAzul_1.1.3.zip
macOS binary (arm64)BiocAzul_1.1.3.tgz
macOS binary (x86_64)BiocAzul_1.1.3.tgz
Dependencies

Depends: R (>= 4.5.0), AnVIL

Imports: AnVILPublish (>= 1.21.1), dplyr, httr, jsonlite, progress, rlang, methods, tidyr

Suggests: BiocStyle, knitr, rmarkdown, tinytest