GCPtools
Tools for working with gcloud and gsutil
Bioconductor version: 3.24 · Package version: 1.3.2
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Lower-level functionality to interface with Google Cloud Platform tools. 'gcloud' and 'gsutil' are both supported. The functionality provided centers around utilities for the AnVIL platform.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GCPtools")Details
| Maintainer | Marcel Ramos <marcel.ramos@sph.cuny.edu> |
| Author | Marcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Nitesh Turaga [aut], Martin Morgan [aut] (ORCID: <https://orcid.org/0000-0002-5874-8148>) |
| License | Artistic-2.0 |
| URL | https://github.com/Bioconductor/GCPtools |
| Bug Reports | https://github.com/Bioconductor/GCPtools/issues |
| System Requirements | gsutil, gcloud |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, Infrastructure, Software, ThirdPartyClient |
| Package Short Url | https://bioconductor.org/packages/GCPtools/ |
Citation
From within R, enter citation("GCPtools"):
Marcel Ramos, Nitesh Turaga, Martin Morgan. GCPtools: Tools for working with gcloud and gsutil. doi:10.18129/B9.bioc.GCPtools, R package version 1.3.2, https://bioconductor.org/packages/GCPtools.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GCPtools_1.3.2.tar.gz |
| Windows binary (x86_64) | GCPtools_1.3.2.zip |
| macOS binary (arm64) | GCPtools_1.3.2.tgz |
| macOS binary (x86_64) | GCPtools_1.3.2.tgz |
Dependencies
Depends: R (>= 4.5.0)
Imports: AnVILBase, BiocBaseUtils, dplyr, httr, rlang, tibble, tidyr, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0)
Reverse dependencies
Imports Me (3): AnVIL, AnVILGCP, AnVILWorkflow
Suggests Me (3): AnVILBase, AnVILPublish, terraTCGAdata