SANTA
Spatial Analysis of Network Associations
Bioconductor version: 3.24 · Package version: 2.49.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package provides methods for measuring the strength of association between a network and a phenotype. It does this by measuring clustering of the phenotype across the network (Knet). Vertices can also be individually ranked by their strength of association with high-weight vertices (Knode).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SANTA")Details
| Maintainer | Alex Cornish <alexcornish88@gmail.com> |
| Author | Alex Cornish [cre, aut] |
| License | GPL (>= 2) |
| Bug Reports | https://github.com/alexjcornish/SANTA |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Clustering, Network, NetworkEnrichment, Software |
| Package Short Url | https://bioconductor.org/packages/SANTA/ |
Citation
From within R, enter citation("SANTA"):
Alex Cornish. SANTA: Spatial Analysis of Network Associations. doi:10.18129/B9.bioc.SANTA, R package version 2.49.0, https://bioconductor.org/packages/SANTA.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | SANTA_2.49.0.tar.gz |
| Windows binary (x86_64) | SANTA_2.49.0.zip |
| macOS binary (arm64) | SANTA_2.49.0.tgz |
| macOS binary (x86_64) | SANTA_2.49.0.tgz |