SQUADD
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This is the development version of SQUADD; for the stable release version, see SQUADD.
Add-on of the SQUAD Software
Bioconductor version: Development (3.19)
This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.
Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios
Maintainer: Martial Sankar <martial.sankar at sib.swiss>
citation("SQUADD")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SQUADD")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | GraphAndNetwork, Network, Software, Visualization |
| Version | 1.53.1 |
| In Bioconductor since | BioC 2.7 (R-2.12) (13.5 years) |
| License | GPL (>=2) |
| Depends | R (>= 2.11.0) |
| Imports | graphics, grDevices, methods, RColorBrewer, stats, utils |
| System Requirements | |
| URL | http://www.unil.ch/dbmv/page21142_en.html |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | SQUADD_1.53.1.zip (64-bit only) |
| macOS Binary (x86_64) | SQUADD_1.53.1.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/SQUADD |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SQUADD |
| Package Short Url | https://bioconductor.org/packages/SQUADD/ |
| Package Downloads Report | Download Stats |