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chihaya

This is the development version of chihaya; for the stable release version, see chihaya.

Save Delayed Operations to a HDF5 File


Bioconductor version: Development (3.19)

Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

Author: Aaron Lun [cre, aut]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("chihaya")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("chihaya")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chihaya")
User guide HTML R Script
Reference Manual PDF

Details

biocViews DataImport, DataRepresentation, Software
Version 1.3.0
In Bioconductor since BioC 3.17 (R-4.3) (1 year)
License GPL-3
Depends DelayedArray
Imports methods, Matrix, rhdf5, Rcpp, HDF5Array
System Requirements C++17, GNU make
URL https://github.com/ArtifactDB/chihaya-R
Bug Reports https://github.com/ArtifactDB/chihaya-R/issues
See More
Suggests BiocGenerics, S4Vectors, BiocSingular, ResidualMatrix, BiocStyle, testthat, rmarkdown, knitr
Linking To Rcpp, Rhdf5lib
Enhances
Depends On Me
Imports Me
Suggests Me alabaster.matrix
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package chihaya_1.3.0.tar.gz
Windows Binary chihaya_1.3.0.zip
macOS Binary (x86_64) chihaya_1.3.0.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/chihaya
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/chihaya
Bioc Package Browser https://code.bioconductor.org/browse/chihaya/
Package Short Url https://bioconductor.org/packages/chihaya/
Package Downloads Report Download Stats