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cleaver

This is the development version of cleaver; for the stable release version, see cleaver.

All Bioconductor versions of cleaver

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Cleavage of Polypeptide Sequences

Bioconductor version: 3.24 · Package version: 1.51.0

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Author: Sebastian Gibb [aut, cre] ORCID iD ORCID: 0000-0001-7406-4443

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

DOI: 10.18129/B9.bioc.cleaver

Citation

From within R, enter citation("cleaver"):

Sebastian Gibb. cleaver: Cleavage of Polypeptide Sequences. doi:10.18129/B9.bioc.cleaver, R package version 1.51.0, https://bioconductor.org/packages/cleaver.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("cleaver")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.51.0
LicenseGPL (>= 3)
URLhttps://codeberg.org/sgibb/cleaver/
Bug Reportshttps://codeberg.org/sgibb/cleaver/issues/
Last updated2026-04-28
In Bioconductor sinceBioC 2.13 (R-3.0) (12 years)
Downloads rank538 of 2,456
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsProteomics, Software
Package Short Url https://bioconductor.org/packages/cleaver/

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cleaver")
In-silico cleavage of polypeptides using the cleaver package HTML R Script
Reference ManualPDF
NEWSText

Download

Follow the installation instructions to use this package in your R session.

Source packagecleaver_1.51.0.tar.gz
Windows binary (x86_64)cleaver_1.51.0.zip
macOS binary (arm64)cleaver_1.51.0.tgz
macOS binary (x86_64)cleaver_1.51.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/cleaver
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/cleaver
Package Downloads ReportDownload Stats
Dependencies

Depends: R (>= 3.0.0), methods, Biostrings (>= 1.29.8)

Imports: S4Vectors, IRanges

Suggests: testthat (>= 0.8), knitr, BiocStyle (>= 0.0.14), rmarkdown, BRAIN, UniProt.ws (>= 2.36.5)

Reverse dependencies

Imports Me (2): pepVet, ProteoDisco

Suggests Me (1): RforProteomics