fastRanges
Deterministic Multithreaded Genomic Interval Operations
Bioconductor version: 3.24 · Package version: 1.1.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
High-performance interval overlap and join operations for 'IRanges' and 'GenomicRanges'. The package provides deterministic multithreaded overlap computation, reusable subject indexes for repeated queries, and join helpers that keep range metadata in a consistent output grammar.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("fastRanges")Details
| Maintainer | Chirag Parsania <chirag.parsania@gmail.com> |
| Author | Chirag Parsania [aut, cre] (github: cparsania) |
| License | Artistic-2.0 |
| URL | https://github.com/cparsania/fastRanges, https://cparsania.github.io/fastRanges/ |
| Bug Reports | https://github.com/cparsania/fastRanges/issues |
| System Requirements | quarto |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Sequencing, Software |
| Package Short Url | https://bioconductor.org/packages/fastRanges/ |
Citation
From within R, enter citation("fastRanges"):
Chirag Parsania. fastRanges: Deterministic Multithreaded Genomic Interval Operations. doi:10.18129/B9.bioc.fastRanges, R package version 1.1.0, https://bioconductor.org/packages/fastRanges.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | fastRanges_1.1.0.tar.gz |
| Windows binary (x86_64) | fastRanges_1.1.0.zip |
| macOS binary (arm64) | fastRanges_1.1.0.tgz |
| macOS binary (x86_64) | fastRanges_1.1.0.tgz |