miaTime
Microbiome Time Series Analysis
Bioconductor version: 3.24 · Package version: 1.3.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
The `miaTime` package provides tools for microbiome time series analysis based on (Tree)SummarizedExperiment infrastructure.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miaTime")Details
| Maintainer | Tuomas Borman <tuomas.v.borman@utu.fi> |
| Author | Leo Lahti [aut] (ORCID: <https://orcid.org/0000-0001-5537-637X>), Tuomas Borman [aut, cre] (ORCID: <https://orcid.org/0000-0002-8563-8884>), Yagmur Simsek [aut], Sudarshan Shetty [ctb], Chouaib Benchraka [ctb], Muluh Muluh [ctb], Ali Hajj [ctb] |
| License | Artistic-2.0 | file LICENSE |
| URL | https://github.com/microbiome/miaTime |
| Bug Reports | https://github.com/microbiome/miaTime/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Microbiome, Sequencing, Software |
| Package Short Url | https://bioconductor.org/packages/miaTime/ |
Citation
From within R, enter citation("miaTime"):
Leo Lahti, Tuomas Borman, Yagmur Simsek. miaTime: Microbiome Time Series Analysis. doi:10.18129/B9.bioc.miaTime, R package version 1.3.0, https://bioconductor.org/packages/miaTime.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | miaTime_1.3.0.tar.gz |
| Windows binary (x86_64) | miaTime_1.3.0.zip |
| macOS binary (arm64) | miaTime_1.3.0.tgz |
| macOS binary (x86_64) | miaTime_1.3.0.tgz |