VERSION 1.25.+ ---------------------- - Remove shiny app to modify thresholds as rbokeh is deprecated. VERSION 1.19.+ ---------------------- - New function: AUCell_assignCells() VERSION 1.17.+ ---------------------- - New function: AUCell_run() - Support for DelayedArray and Sparse matrices VERSION 1.13.+ ---------------------- - New function: plotEmb_rgb() and getSetNames() VERSION 1.7.+ ---------------------- - Added function cbind() VERSION 1.5.+ ---------------------- - Added function orderAUC() - Error fixes in AUCell_plotTSNE() VERSION 1.2.0 ---------------------- - Added shiny app to modify thresholds - Added support for sparse matrices (dgCMatrix) - New function: AUCell_plotTSNE() - AUC values are normalized to max 1 by default. VERSION 0.99.6 ---------------------- - Interface changes to conform to Bioconductor requirements. (Function names and parameters, usage of "GeneSet" from GSEABase...)