aa05bd3bd4e875b4d813544341f55d90 *DESCRIPTION
94c8b2cb1957f9b305b1f1a6ae9ab9ed *LICENSE
990fec25c034236afe7572d887ad9861 *NAMESPACE
a56b570ca7fd4726f3d9b1bd48c0baca *NEWS.md
4b6124ce133c4af0a9cde8b971ab4a5c *R/AllClasses.R
7e3b599f35104aeaf5a996ad33de986f *R/RcppExports.R
e22e446572ba93c0cd142b0475d75212 *R/addWeights.R
4c69c07e2d951670dae57107a8af2453 *R/calculateActivity.R
6077149b575e3262c7851ec7ce7631d5 *R/calculateP2G.R
b2b151db7242b1922205f28bf3e657df *R/cellAggregation.R
52ece02a29ef3d1a95bbbb3d9cad4fb7 *R/constructRegulon.R
cb52783688db9c339af1ef6570956968 *R/epiregulon-package.R
9c1874b0426399de3288d4a3856037d3 *R/motif.R
4e3ffe5676314898c70363b8e6e63035 *R/regulonPruning.R
d41d8cd98f00b204e9800998ecf8427e *R/rename_files.R
857777eb1b53e20babae98d2808d880d *R/utils.R
132280ce18b4dcd4cfcce785f5ab5603 *R/validation.R
339786daa59bf7a7c3cf4d9eb07085f4 *README.md
559a439ba967c8846f42d9de36a265c2 *build/vignette.rds
bd94b7c733ccd36e9e4e8af39e1ebc19 *inst/CITATION
ff86d6d6f7b1487b3232516edc355cb4 *inst/doc/multiome.mae.R
c2856f560702066cfda37897b5122bdc *inst/doc/multiome.mae.Rmd
4c1f84390b2dcc3ea2246fab1613f005 *inst/doc/multiome.mae.html
48111f123831a6a7372c14f1205cbcba *inst/epiregulon_functions.png
69b9216618c00c5b83d375ca91276de2 *inst/epiregulon_logo.png
b1a7ead75403317aa5c49e891392f49a *inst/epiregulon_schematics.svg
c9aab61ca61d01876014062d4b5e422d *man/addLogFC.Rd
d985ec22484abb13a67823ebbf6b2c29 *man/addMotifScore.Rd
5a00abf2374467cefa8458904c9ab112 *man/addTFMotifInfo.Rd
aea175c5a3c43bff89393a3a21c8c4d9 *man/addWeights.Rd
1a858c47fd6abea3d6a913e30b04fd3e *man/aggregateAcrossCellsFast.Rd
bf6eae3028adde9c4c9de93f1c35231c *man/calculateActivity.Rd
05915f32401aba3ffa55971d64b69447 *man/calculateP2G.Rd
67deb9f0e6e6689a4dc3b81c8fc65c0f *man/epiregulon-package.Rd
eff8e9a3dc4dd84eac9b45e28e7ceb3c *man/getRegulon.Rd
ca687955bb22965a4c065fb425b1a41f *man/getTFMotifInfo.Rd
495008b9feaeeee74391d7e2af37ccfa *man/optimizeMetacellNumber.Rd
22db9517413362c798da3955db8dbd0d *man/pruneRegulon.Rd
79496360a88f123abc5bf8376bbc2f8b *src/RcppExports.cpp
3ecda6e87bcd63657843743a5bb31854 *src/binom.c
d5541bd4a9d59fd020f2f0d2089e3e81 *src/fast_chisq.cpp
5428bc80fd9c0ac260b42b97a6194733 *src/fast_wilcox.cpp
4f984e55b37c6e6ce716250462dc0b7f *tests/testthat.R
3fe3a4e7f54a15083200a6508f2f6d89 *tests/testthat/test-addWeights.R
b589ec2d75a2e758bea093b060b1b40a *tests/testthat/test-calculateActivity.R
c5a104d65ac3c70c81959a272120cfe4 *tests/testthat/test-calculateP2G.R
2badb4e8ee2e297de9cb3a258e6c3da3 *tests/testthat/test-constructRegulon.R
e3f1751ee4191a39534f52ec52e94793 *tests/testthat/test-fast_wilcox.R
8929f4ec7304d3162a9d61b2a21f86b9 *tests/testthat/test-fastcount.R
f70db4a2339c3038c6831a9b81821464 *tests/testthat/test-motif.R
e2313ab60a9f112fbbdcb521f5fdf9b6 *tests/testthat/test-regulonPruning.R
145e4b2e967cae3f201be31bb7e3e64c *tests/testthat/test-utils.R
015a9d3f69cc9334ccb3e56b51155820 *tests/testthat/test-validation.R
c2856f560702066cfda37897b5122bdc *vignettes/multiome.mae.Rmd
