## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----setup-------------------------------------------------------------------- library(SimBu) ## ----eval=FALSE--------------------------------------------------------------- # setup_list <- SimBu::setup_sfaira(basedir = tempdir()) ## ----eval=FALSE--------------------------------------------------------------- # ds_pancrease <- SimBu::dataset_sfaira_multiple( # sfaira_setup = setup_list, # organisms = "Homo sapiens", # tissues = "pancreas", # name = "human_pancreas" # ) ## ----eval=FALSE--------------------------------------------------------------- # all_datasets <- SimBu::sfaira_overview(setup_list = setup_list) # head(all_datasets) ## ----eval=FALSE--------------------------------------------------------------- # SimBu::dataset_sfaira( # sfaira_id = "homosapiens_lungparenchyma_2019_10x3v2_madissoon_001_10.1186/s13059-019-1906-x", # sfaira_setup = setup_list, # name = "dataset_by_id" # ) ## ----------------------------------------------------------------------------- utils::sessionInfo()