dsQTL

DOI: 10.18129/B9.bioc.dsQTL    

This is the development version of dsQTL; for the stable release version, see dsQTL.

dsQTL, data excerpt from Degner et al. 2012 Nature letter

Bioconductor version: Development (3.13)

dsQTL, excerpt from Degner et al. 2012 Nature letter on DNA variants associated with DnaseI hypersensitivity

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("dsQTL")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("dsQTL")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews BiocViews, DNASeqData, ExperimentData, Genome, NCI, Project1000genomes, SequencingData
Version 0.29.0
License Artistic-2.0
Depends R (>= 2.15.0), utils, Biobase, SummarizedExperiment, GGBase (>= 3.31.1)
Imports
LinkingTo
Suggests GGtools, rtracklayer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/dsQTL
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/dsQTL
Package Short Url https://bioconductor.org/packages/dsQTL/
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