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ggtreeExtra

This is the released version of ggtreeExtra; for the devel version, see ggtreeExtra.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12

An R Package To Add Geometric Layers On Circular Or Other Layout Tree Of "ggtree"

DOI: 10.18129/B9.bioc.ggtreeExtra

Bioconductor version: Release (3.23)

'ggtreeExtra' extends the method for mapping and visualizing associated data on phylogenetic tree using 'ggtree'. These associated data can be presented on the external panels to circular layout, fan layout, or other rectangular layout tree built by 'ggtree' with the grammar of 'ggplot2'.

Author: Shuangbin Xu [aut, cre] ORCID: 0000-0003-3513-5362 , Guangchuang Yu [aut, ctb] ORCID: 0000-0002-6485-8781

Maintainer: Shuangbin Xu <xshuangbin at 163.com>

Citation (from within R, enter citation("ggtreeExtra")):

Shuangbin Xu, Guangchuang Yu. ggtreeExtra: An R Package To Add Geometric Layers On Circular Or Other Layout Tree Of "ggtree". doi:10.18129/B9.bioc.ggtreeExtra, R package version 1.22.1, https://bioconductor.org/packages/ggtreeExtra.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ggtreeExtra")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ggtreeExtra")

Details

Package Archives

Follow Installation instructions to use this package in your R session.