miaDash
This is the released version of miaDash; for the devel version, see miaDash.
All Bioconductor versions of miaDash
3.24 (devel), 3.23 (release), 3.22, 3.21
Dashboard for the interactive analysis and exploration of microbiome data
Bioconductor version: 3.23 · Package version: 1.4.0
miaDash provides a Graphical User Interface for the exploration of microbiome data. This way, no knowledge of programming is required to perform analyses. Datasets can be imported, manipulated, analysed and visualised with a user-friendly interface.
Author: Giulio Benedetti [aut, cre] 
, Akewak Jeba [ctb] , Leo Lahti [aut]
Maintainer: Giulio Benedetti <giulio.benedetti at utu.fi>
Citation
From within R, enter citation("miaDash"):
Giulio Benedetti, Leo Lahti. miaDash: Dashboard for the interactive analysis and exploration of microbiome data. doi:10.18129/B9.bioc.miaDash, R package version 1.4.0, https://bioconductor.org/packages/miaDash.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miaDash")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.4.0 |
| License | Artistic-2.0 |
| URL | https://github.com/microbiome/miaDash |
| Bug Reports | https://github.com/microbiome/miaDash/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.21 (R-4.5) (1 year) |
| Downloads rank | 2165 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, GUI, Microbiome, ShinyApps, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/miaDash/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("miaDash")| miaDash | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | miaDash_1.4.0.tar.gz |
| Windows binary (x86_64) | miaDash_1.4.0.zip |
| macOS binary (arm64) | miaDash_1.4.0.tgz |
| macOS binary (x86_64) | miaDash_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/miaDash |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/miaDash |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 4.4.0), iSEE (>= 2.19.4), shiny
Imports: ape, bluster, htmltools, iSEEtree (>= 1.1.4), mia, rintrojs, scater, scuttle, shinydashboard, shinyjs, shinyWidgets, S4Vectors, SingleCellExperiment, SummarizedExperiment, TreeSummarizedExperiment, utils, vegan
Suggests: BiocStyle, knitr, philr, remotes, rmarkdown, testthat (>= 3.0.0)