CommonFeatures,tpcaResult-method
                        Extract CommonFeatures
ComplexAnnotation,tpcaResult-method
                        Extract ComplexAnnotation
ComplexBackgroundDistributionList,tpcaResult-method
                        Extract ComplexBackgroundDistributionList
ComplexRocTable,tpcaResult-method
                        Extract ComplexRocTable
ContrastCondName,tpcaResult-method
                        Extract ContrastCondName
ContrastDistMat,tpcaResult-method
                        Extract ContrastDistMat
ContrastList,tpcaResult-method
                        Extract ContrastList
CtrlCondName,tpcaResult-method
                        Extract CtrlCondName
DistMat,tpcaResult-method
                        Extract DistMat
DistMethod,tpcaResult-method
                        Extract DistMethod
ObjList,tpcaResult-method
                        Extract ObjList
PPiAnnotation,tpcaResult-method
                        Extract PPiAnnotation
PPiRocTable,tpcaResult-method
                        Extract PPiRocTable
PPiRocTableAnno,tpcaResult-method
                        Extract PPiRocTableAnno
SetCommonFeatures,tpcaResult-method
                        Set CommonFeatures
SetComplexAnnotation,tpcaResult-method
                        Set ComplexAnnotation
SetComplexBackgroundDistributionList,tpcaResult-method
                        Set ComplexBackgroundDistributionList
SetComplexRocTable,tpcaResult-method
                        Set ComplexRocTable
SetContrastCondName,tpcaResult-method
                        Set ContrastCondName
SetContrastDistMat,tpcaResult-method
                        Set ContrastDistMat
SetCtrlCondName,tpcaResult-method
                        Set CtrlCondName
SetDiffTpcaResultTable,tpcaResult-method
                        Set diffTpcaResultTable
SetDistMat,tpcaResult-method
                        Set DistMat
SetDistMethod,tpcaResult-method
                        Set distMethod
SetPPiRocTable,tpcaResult-method
                        Set PPiRocTable
SetPPiRocTableAnno,tpcaResult-method
                        Set PPiRocTableAnno
SetSummaryMethod,tpcaResult-method
                        Set summaryMethod
SetTpcaResultTable,tpcaResult-method
                        Set TpcaResultTable
SummaryMethod,tpcaResult-method
                        Extract SummaryMethod
createDistMat           Create distance matrix of all vs all protein
                        melting profiles
diffTpcaResultTable,tpcaResult-method
                        Extract diffTpcaResultTable
ori_et_al_complex_ppis
                        Data frame of eukaryotic protein-protein
                        interactions inferred from annotated protein
                        complexes by Ori et al. and StringDB
                        interations with a combined score of at least
                        900
ori_et_al_complexes_df
                        Data frame of annotated protein complexes by
                        Ori et al.
plotComplexRoc          Plot Complex ROC curve
plotDiffTpcaVolcano     Plot differential TPCA analysis results
plotPPiProfiles         Plot thermal profile of protein pairs
plotPPiRoc              Plot PPI ROC curve
plotTpcaVolcano         Plot TPCA analysis results
runDiffTPCA             Run differential TPCA analysis
runTPCA                 Run the TPCA analysis
string_ppi_df           Data frame of annotated human protein-protein
                        interactions retrieved from stringDB with a
                        combined interaction score equal or higher than
                        700
tpcaResult-class        S4 TPCA Result Class
tpcaResultTable,tpcaResult-method
                        Extract tpcaResultTable
