functions for genome-wide application of Liquid Association

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Documentation for package ‘fastLiquidAssociation’ version 1.44.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

fastLiquidAssociation-package	Functions to extend liquid association (LA) analysis for genome-wide use
fastboots.GLA	Function to parallelize bootstrapping for MLA robust estimates.
fastboots.GLA-class	Function to parallelize bootstrapping for MLA robust estimates.
fastboots.GLA-method	Function to parallelize bootstrapping for MLA robust estimates.
fastboots.GLA-methods	Function to parallelize bootstrapping for MLA robust estimates.
fastLiquidAssociation	Functions to extend liquid association (LA) analysis for genome-wide use
fastMLA	Function to more efficiently screen for gene triplets for those with a high liquid association value.
fastMLA-class	Function to more efficiently screen for gene triplets for those with a high liquid association value.
fastMLA-method	Function to more efficiently screen for gene triplets for those with a high liquid association value.
fastMLA-methods	Function to more efficiently screen for gene triplets for those with a high liquid association value.
mass.CNM	Function to obtain CNM significance estimates from an object result of fastMLA.
mass.CNM-class	Function to obtain CNM significance estimates from an object result of fastMLA.
mass.CNM-method	Function to obtain CNM significance estimates from an object result of fastMLA.
mass.CNM-methods	Function to obtain CNM significance estimates from an object result of fastMLA.
testmat	Example results from fastMLA requiring all significance methods