Analyzing tRNA sequences and structures
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Documentation for package ‘tRNA’ version 1.26.0
Help Pages
| tRNA-package | tRNA: analyzing tRNA sequences and structures |
| gettRNABasePairing | Accessing Dot Bracket annotation of tRNAs |
| gettRNABasePairing-method | Accessing Dot Bracket annotation of tRNAs |
| gettRNAFeaturePlots | Graphical summary of tRNA features |
| gettRNAFeaturePlots-method | Graphical summary of tRNA features |
| gettRNALoopIDs | Accessing Dot Bracket annotation of tRNAs |
| gettRNALoopIDs-method | Accessing Dot Bracket annotation of tRNAs |
| gettRNAstructureGRanges | tRNA structures and sequences |
| gettRNAstructureGRanges-method | tRNA structures and sequences |
| gettRNAstructureSeqs | tRNA structures and sequences |
| gettRNAstructureSeqs-method | tRNA structures and sequences |
| gettRNASummary | Summary of tRNA features |
| gettRNASummary-method | Summary of tRNA features |
| gr | tRNA example data |
| gr_eco | tRNA example data |
| gr_human | tRNA example data |
| gr_human2 | tRNA example data |
| hasAcceptorStem | Subsetting tRNAs |
| hasAcceptorStem-method | Subsetting tRNAs |
| hasAnticodonLoop | Subsetting tRNAs |
| hasAnticodonLoop-method | Subsetting tRNAs |
| hasAnticodonStem | Subsetting tRNAs |
| hasAnticodonStem-method | Subsetting tRNAs |
| hasDloop | Subsetting tRNAs |
| hasDloop-method | Subsetting tRNAs |
| hasDStem | Subsetting tRNAs |
| hasDStem-method | Subsetting tRNAs |
| hasTloop | Subsetting tRNAs |
| hasTloop-method | Subsetting tRNAs |
| hasTStem | Subsetting tRNAs |
| hasTStem-method | Subsetting tRNAs |
| hasVariableLoop | Subsetting tRNAs |
| hasVariableLoop-method | Subsetting tRNAs |
| istRNAGRanges | tRNA compatibility check |
| istRNAGRanges-method | tRNA compatibility check |
| tRNA | tRNA: analyzing tRNA sequences and structures |
| tRNA-data | tRNA example data |
| tRNA-subset | Subsetting tRNAs |