BioCartaImage

DOI: 10.18129/B9.bioc.BioCartaImage  

BioCarta Pathway Images

Bioconductor version: Release (3.18)

The core functionality of the package is to provide coordinates of genes on the BioCarta pathway images and to provide methods to add self-defined graphics to the genes of interest.

Author: Zuguang Gu [aut, cre]

Maintainer: Zuguang Gu <z.gu at dkfz.de>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BioCartaImage")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BioCartaImage")

 

HTML	R Script	Customize BioCarta Pathway Images
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	BioCarta, Pathways, Software, Visualization
Version	1.0.0
In Bioconductor since	BioC 3.18 (R-4.3) (< 6 months)
License	MIT + file LICENSE
Depends	R (>= 4.3.0)
Imports	magick, grid, stats, grDevices, utils
LinkingTo
Suggests	testthat, knitr, BiocStyle, ragg
SystemRequirements
Enhances
URL	https://github.com/jokergoo/BioCartaImage
BugReports	https://github.com/jokergoo/BioCartaImage/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BioCartaImage_1.0.0.tar.gz
Windows Binary	BioCartaImage_1.0.0.zip
macOS Binary (x86_64)	BioCartaImage_1.0.0.tgz
macOS Binary (arm64)	BioCartaImage_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BioCartaImage
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BioCartaImage
Bioc Package Browser	https://code.bioconductor.org/browse/BioCartaImage/
Package Short Url	https://bioconductor.org/packages/BioCartaImage/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.18	Source Archive