GOfan
Sunburst Plot for Enriched Gene Ontology Terms
Bioconductor version: 3.23 · Package version: 1.0.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
GOfan provides an intuitive and compact visualization of Gene Ontology (GO) enrichment results using a sunburst layout inspired by SynGO, preserving hierarchical relationships among GO terms and allowing color-based encoding of information such as p-values or gene counts. By converting complex GO DAGs into clean, circular representations, it allows researchers to quickly grasp the hierarchical structure and biological significance of enriched terms. The interactive and customizable visualizations facilitate exploration of key GO categories, enhancing interpretation and presentation of enrichment analyses.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GOfan")Details
| Maintainer | Jianhong Ou <jou@morgridge.org> |
| Author | Jianhong Ou [aut, cre] (ORCID: <https://orcid.org/0000-0002-8652-2488>), Kenneth Poss [aut, fnd] |
| License | GPL-3 |
| URL | https://github.com/jianhong/GOfan |
| Bug Reports | https://github.com/jianhong/GOfan/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Annotation, GO, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/GOfan/ |
Citation
From within R, enter citation("GOfan"):
Jianhong Ou, Kenneth Poss. GOfan: Sunburst Plot for Enriched Gene Ontology Terms. doi:10.18129/B9.bioc.GOfan, R package version 1.0.0, https://bioconductor.org/packages/GOfan.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GOfan_1.0.0.tar.gz |
| Windows binary (x86_64) | GOfan_1.0.0.zip |
| macOS binary (arm64) | GOfan_1.0.0.tgz |
| macOS binary (x86_64) | GOfan_1.0.0.tgz |