MouseFM
In-silico methods for genetic finemapping in inbred mice
Bioconductor version: 3.23 · Package version: 1.22.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MouseFM")Details
| Maintainer | Matthias Munz <matthias.munz@gmx.de> |
| Author | Matthias Munz [aut, cre] (ORCID: <https://orcid.org/0000-0002-4728-3357>), Inken Wohlers [aut] (ORCID: <https://orcid.org/0000-0003-4004-0464>), Hauke Busch [aut] (ORCID: <https://orcid.org/0000-0003-4763-4521>) |
| License | GPL-3 |
| Bug Reports | https://github.com/matmu/MouseFM/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | BiomedicalInformatics, FunctionalGenomics, GenePrediction, GeneTarget, Genetics, GenomicVariation, MathematicalBiology, MultipleComparison, PatternLogic, SNP, Software, SystemsBiology, VariantAnnotation |
| Package Short Url | https://bioconductor.org/packages/MouseFM/ |
Citation
From within R, enter citation("MouseFM"):
Matthias Munz, Inken Wohlers, Hauke Busch. MouseFM: In-silico methods for genetic finemapping in inbred mice. doi:10.18129/B9.bioc.MouseFM, R package version 1.22.0, https://bioconductor.org/packages/MouseFM.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
- Fetch homozygous genotypes of inbred mouse strains
- Finemapping of genetic regions in inbred mice
- Prioritization of inbred mouse strains for resolving genetic regions
Download
Follow the installation instructions to use this package in your R session.
| Source package | MouseFM_1.22.0.tar.gz |
| Windows binary (x86_64) | MouseFM_1.22.0.zip |
| macOS binary (arm64) | MouseFM_1.22.0.tgz |
| macOS binary (x86_64) | MouseFM_1.22.0.tgz |