• Home
• Bioconductor 3.23
• Software Packages
• NTW

NTW

This is the released version of NTW; for the devel version, see NTW.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7

Predict gene network using an Ordinary Differential Equation (ODE) based method

DOI: 10.18129/B9.bioc.NTW

Bioconductor version: Release (3.23)

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>

Citation (from within R, enter citation("NTW")):

Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini. NTW: Predict gene network using an Ordinary Differential Equation (ODE) based method. doi:10.18129/B9.bioc.NTW, R package version 1.62.0, https://bioconductor.org/packages/NTW.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("NTW")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NTW")

Details

Package Archives

Follow Installation instructions to use this package in your R session.