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PTMods

Managing Post-Translational Modifications in R

Bioconductor version: 3.23 · Package version: 1.0.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

An interface to the community supported database for amino acid/protein modifications using mass spectrometry.

DOI: 10.18129/B9.bioc.PTMods

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PTMods")

Details

MaintainerGuillaume Deflandre <guillaume.deflandre@uclouvain.be>
AuthorLaurent Gatto [aut] (ORCID: <https://orcid.org/0000-0002-1520-2268>), Sebastian Gibb [aut] (ORCID: <https://orcid.org/0000-0001-7406-4443>), Guillaume Deflandre [cre] (ORCID: <https://orcid.org/0009-0008-1257-2416>)
LicenseGPL-3
URLhttps://github.com/RforMassSpectrometry/PTMods
Bug Reportshttps://github.com/RforMassSpectrometry/PTMods/issues
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsMassSpectrometry, Proteomics, Software
Package Short Url https://bioconductor.org/packages/PTMods/

Citation

From within R, enter citation("PTMods"):

Laurent Gatto, Sebastian Gibb. PTMods: Managing Post-Translational Modifications in R. doi:10.18129/B9.bioc.PTMods, R package version 1.0.0, https://bioconductor.org/packages/PTMods.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagePTMods_1.0.0.tar.gz
Windows binary (x86_64)PTMods_1.0.0.zip
macOS binary (arm64)PTMods_1.0.0.tgz
macOS binary (x86_64)PTMods_1.0.0.tgz
Dependencies

Depends: R (>= 4.5.0), methods

Suggests: xml2, testthat, knitr, BiocStyle, Biostrings

Enhances: PSMatch

Reverse dependencies

Depends On Me (1): PSMatch

Imports Me (1): MSnbase