RUVnormalize

DOI: 10.18129/B9.bioc.RUVnormalize    

RUV for normalization of expression array data

Bioconductor version: Release (3.7)

RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.

Author: Laurent Jacob

Maintainer: Laurent Jacob <laurent.jacob at univ-lyon1.fr>

Citation (from within R, enter citation("RUVnormalize")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RUVnormalize")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RUVnormalize")

 

PDF R Script RUVnormalize
PDF   Reference Manual
Text   NEWS

Details

biocViews Normalization, Software, StatisticalMethod
Version 1.14.0
In Bioconductor since BioC 3.0 (R-3.1) (4 years)
License GPL-3
Depends R (>= 2.10.0)
Imports RUVnormalizeData, Biobase
LinkingTo
Suggests
SystemRequirements
Enhances spams
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RUVnormalize_1.14.0.tar.gz
Windows Binary RUVnormalize_1.14.0.zip
Mac OS X 10.11 (El Capitan) RUVnormalize_1.14.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RUVnormalize
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RUVnormalize
Package Short Url http://bioconductor.org/packages/RUVnormalize/
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