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codelink

This is the released version of codelink; for the devel version, see codelink.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Manipulation of Codelink microarray data


Bioconductor version: Release (3.23)

This package facilitates reading, preprocessing and manipulating Codelink microarray data. The raw data must be exported as text file using the Codelink software.

Author: Diego Diez

Maintainer: Diego Diez <diego10ruiz at gmail.com>

Citation (from within R, enter citation("codelink")):

Diego Diez. codelink: Manipulation of Codelink microarray data. doi:10.18129/B9.bioc.codelink, R package version 1.80.0, https://bioconductor.org/packages/codelink.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("codelink")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("codelink")
Codelink Intruction PDF R Script
Codelink Legacy PDF R Script
Reference ManualPDF
NEWSText

Details

biocViews DataImport, Microarray, OneChannel, Preprocessing, Software
Version1.80.0
In Bioconductor sinceBioC 1.8 (R-2.3) (20.5 years)
License GPL-2
Depends R (>= 2.10), BiocGenerics (>= 0.3.2), methods, Biobase (>= 2.17.8), limma
Imports annotate
System Requirements
URLhttps://github.com/ddiez/codelink
Bug Reportshttps://github.com/ddiez/codelink/issues
See More
Suggests genefilter, parallel, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me AgiMicroRna, MAQCsubset
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package codelink_1.80.0.tar.gz
Windows Binary (x86_64) codelink_1.80.0.zip
macOS Binary (big-sur-x86_64) codelink_1.80.0.tgz
macOS Binary (sonoma-arm64) codelink_1.80.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/codelink
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/codelink
Package Short Url https://bioconductor.org/packages/codelink/
Package Downloads ReportDownload Stats