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flowCHIC

This is the released version of flowCHIC; for the devel version, see flowCHIC.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

Analyze flow cytometric data using histogram information


Bioconductor version: Release (3.23)

A package to analyze flow cytometric data of complex microbial communities based on histogram images

Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>

Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>

Citation (from within R, enter citation("flowCHIC")):

Joachim Schumann, Christin Koch, Ingo Fetzer, Susann Müller. flowCHIC: Analyze flow cytometric data using histogram information. doi:10.18129/B9.bioc.flowCHIC, R package version 1.46.0, https://bioconductor.org/packages/flowCHIC.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowCHIC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowCHIC")
Analyze flow cytometric data using histogram information PDF R Script
Reference ManualPDF

Details

biocViews CellBasedAssays, Clustering, FlowCytometry, ImmunoOncology, Software, Visualization
Version1.46.0
In Bioconductor sinceBioC 3.0 (R-3.1) (12 years)
License GPL-2
Depends R (>= 3.1.0)
Imports methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid
System Requirements
URLhttp://www.ufz.de/index.php?en=16773
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowCHIC_1.46.0.tar.gz
Windows Binary (x86_64) flowCHIC_1.46.0.zip
macOS Binary (big-sur-x86_64) flowCHIC_1.46.0.tgz
macOS Binary (sonoma-arm64) flowCHIC_1.46.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/flowCHIC
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/flowCHIC
Package Short Url https://bioconductor.org/packages/flowCHIC/
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