methVisual

DOI: 10.18129/B9.bioc.methVisual    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

Methods for visualization and statistics on DNA methylation data

Bioconductor version: Release (3.12)

The package 'methVisual' allows the visualization of DNA methylation data after bisulfite sequencing.

Author: A. Zackay, C. Steinhoff

Maintainer: Arie Zackay <arie.zackay at mail.huji.ac.il>

Citation (from within R, enter citation("methVisual")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("methVisual")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews Classification, Clustering, DNAMethylation, Software
Version 1.42.0
In Bioconductor since BioC 2.6 (R-2.11) (10.5 years)
License GPL (>= 2)
Depends R (>= 2.11.0), Biostrings(>= 2.4.8), plotrix, gsubfn, grid, sqldf
Imports Biostrings, ca, graphics, grDevices, grid, gridBase, IRanges, stats, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/methVisual
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/methVisual
Package Short Url https://bioconductor.org/packages/methVisual/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: