DOI: 10.18129/B9.bioc.netReg    

Network-Regularized Regression Models

Bioconductor version: Release (3.6)

netReg fits linear regression models using network-penalization. Graph prior knowledge, in the form of biological networks, is being incorporated into the likelihood of the linear model. The networks describe biological relationships such as co-regulation or dependency of the same transcription factors/metabolites/etc. yielding a part sparse and part smooth solution for coefficient profiles.

Author: Simon Dirmeier [aut, cre]

Maintainer: Simon Dirmeier <simon.dirmeier at>

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biocViews FeatureExtraction, GraphAndNetwork, Network, Regression, Software, StatisticalMethod
Version 1.2.0
In Bioconductor since BioC 3.5 (R-3.4) (1 year)
License GPL-3
Depends R (>= 3.4)
Imports Rcpp, stats
LinkingTo Rcpp, RcppArmadillo
Suggests testthat, knitr, rmarkdown, BiocStyle, lintr, lassoshooting
SystemRequirements C++11
Depends On Me
Imports Me
Suggests Me
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Source Package netReg_1.2.0.tar.gz
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