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PharmacOGenomics Ontology Support

Bioconductor version: Release (3.19)

Provide simple utilities for querying bhklab PharmacoDB, modeling API outputs, and integrating to cell and compound ontologies.

Author: Vince Carey <stvjc at>

Maintainer: VJ Carey <stvjc at>

Citation (from within R, enter citation("pogos")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

pogos -- simple interface to bhklab PharmacoDB with emphasis on ontology HTML R Script
Reference Manual PDF


biocViews ImmunoOncology, Pharmacogenomics, PooledScreens, Software
Version 1.24.0
In Bioconductor since BioC 3.7 (R-3.5) (6 years)
License Artistic-2.0
Depends R (>= 3.5.0), rjson (>= 0.2.15), httr (>= 1.3.1)
Imports methods, S4Vectors, utils, shiny, ontoProc, ggplot2, graphics
System Requirements
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Suggests knitr, DT, ontologyPlot, testthat, rmarkdown, BiocStyle
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Depends On Me
Imports Me
Suggests Me BiocOncoTK
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package pogos_1.24.0.tar.gz
Windows Binary (64-bit only)
macOS Binary (x86_64) pogos_1.24.0.tgz
macOS Binary (arm64) pogos_1.24.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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