DOI: 10.18129/B9.bioc.prot2D    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see prot2D.

Statistical Tools for volume data from 2D Gel Electrophoresis

Bioconductor version: Release (3.8)

The purpose of this package is to analyze (i.e. Normalize and select significant spots) data issued from 2D GEl experiments

Author: Sebastien Artigaud

Maintainer: Sebastien Artigaud <sebastien.artigaud at>

Citation (from within R, enter citation("prot2D")):


To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("prot2D", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script prot2D
PDF   Reference Manual


biocViews DifferentialExpression, MultipleComparison, Proteomics, Software
Version 1.20.0
In Bioconductor since BioC 2.13 (R-3.0) (5.5 years)
License GPL (>= 2)
Depends R (>= 2.15), fdrtool, st, samr, Biobase, limma, Mulcom, impute, MASS, qvalue
Suggests made4, affy
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package prot2D_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) prot2D_1.20.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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