restfulSE
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface
Bioconductor version: Release (3.19)
This package provides functions and classes to interface with remote data stores by operating on SummarizedExperiment-like objects.
Author: Vincent Carey [aut], Shweta Gopaulakrishnan [cre, aut]
Maintainer: Shweta Gopaulakrishnan <shwetagopaul92 at gmail.com>
Citation (from within R, enter
citation("restfulSE")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("restfulSE")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | Coverage, Infrastructure, Sequencing, SingleCell, Software, Transcriptomics |
Version | 1.26.0 |
In Bioconductor since | BioC 3.6 (R-3.4) (7 years) |
License | Artistic-2.0 |
Depends | R (>= 3.6), SummarizedExperiment, DelayedArray |
Imports | utils, stats, methods, S4Vectors, Biobase, reshape2, AnnotationDbi, DBI, GO.db, rhdf5client, dplyr (>= 0.7.1), magrittr, bigrquery, ExperimentHub, AnnotationHub, rlang |
System Requirements | |
URL |
See More
Suggests | knitr, testthat, Rtsne, org.Mm.eg.db, org.Hs.eg.db, BiocStyle, restfulSEData, rmarkdown |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/restfulSE |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/restfulSE |
Package Short Url | https://bioconductor.org/packages/restfulSE/ |
Package Downloads Report | Download Stats |