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splots

Visualization of high-throughput assays in microtitre plate or slide format


Bioconductor version: Release (3.18)

This package is here to support legacy usages of it, but it should not be used for new code development. It provides a single function, plotScreen, for visualising data in microtitre plate or slide format. As a better alternative for such functionality, please consider the platetools package on CRAN (https://cran.r-project.org/package=platetools and https://github.com/Swarchal/platetools), or ggplot2 (geom_raster, facet_wrap) as exemplified in the vignette of this package.

Author: Wolfgang Huber, Oleg Sklyar

Maintainer: Wolfgang Huber <wolfgang.huber at embl.org>

Citation (from within R, enter citation("splots")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("splots")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("splots")
splots: visualization of data from assays in microtitre plate or slide format HTML R Script
Reference Manual PDF

Details

biocViews MicrotitrePlateAssay, Sequencing, Software, Visualization
Version 1.68.0
In Bioconductor since BioC 1.9 (R-2.4) (17.5 years)
License LGPL
Depends
Imports grid, RColorBrewer
System Requirements
URL
See More
Suggests BiocStyle, knitr, rmarkdown, assertthat, HD2013SGI, dplyr, ggplot2
Linking To
Enhances
Depends On Me cellHTS2, HD2013SGI
Imports Me RNAinteract
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package splots_1.68.0.tar.gz
Windows Binary splots_1.68.0.zip (64-bit only)
macOS Binary (x86_64) splots_1.68.0.tgz
macOS Binary (arm64) splots_1.68.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/splots
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/splots
Bioc Package Browser https://code.bioconductor.org/browse/splots/
Package Short Url https://bioconductor.org/packages/splots/
Package Downloads Report Download Stats