Changes in version 0.99.0 (2020-08-20) + Submitted to Bioconductor Changes in version 0.99.3 (2020-10-08) + Fix error in the algorithm under multiple threading Changes in version 0.99.3 (2020-10-09) + Speed up the filtering process using minMapBase Changes in version 1.1.2 (2020-11-11) + Fix bugs in keeping extra reads when filtering with minMapBase + Allow skipping filtering with minMapBase