BSgenome.Hsapiens.NCBI.GRCh38
This is the released version of BSgenome.Hsapiens.NCBI.GRCh38; for the devel version, see BSgenome.Hsapiens.NCBI.GRCh38.
All Bioconductor versions of BSgenome.Hsapiens.NCBI.GRCh38
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14
Full genome sequences for Homo sapiens (GRCh38)
Bioconductor version: 3.23 · Package version: 1.3.1000
Full genome sequences for Homo sapiens (Human) as provided by NCBI (GRCh38, 2013-12-17) and stored in Biostrings objects.
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation
From within R, enter citation("BSgenome.Hsapiens.NCBI.GRCh38"):
The Bioconductor Dev Team. BSgenome.Hsapiens.NCBI.GRCh38: Full genome sequences for Homo sapiens (GRCh38). doi:10.18129/B9.bioc.BSgenome.Hsapiens.NCBI.GRCh38, R package version 1.3.1000, https://bioconductor.org/packages/BSgenome.Hsapiens.NCBI.GRCh38.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BSgenome.Hsapiens.NCBI.GRCh38")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.3.1000 |
| License | Artistic-2.0 |
| Last updated | 2014-05-13 |
| In Bioconductor since | BioC 2.14 (R-3.1) (12 years) |
| Downloads rank | 36 of 928 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationData, BSgenome, Genetics, Homo_sapiens |
| Package Short Url | https://bioconductor.org/packages/BSgenome.Hsapiens.NCBI.GRCh38/ |
Documentation
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | BSgenome.Hsapiens.NCBI.GRCh38_1.3.1000.tar.gz |
| Package Downloads Report | Download Stats |
Reverse dependencies
Imports Me (1): cfDNAPro
Suggests Me (12): bambu, BSgenome, ensembldb, FRASER, GenomeInfoDb, h5vc, HiCaptuRe, motifbreakR, MungeSumstats, NanoporeRNASeq, raer, scmeth