DREAM4

DOI: 10.18129/B9.bioc.DREAM4    

Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge

Bioconductor version: Release (3.7)

Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Citation (from within R, enter citation("DREAM4")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DREAM4")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DREAM4")

 

PDF R Script DREAM4 Overview
PDF DREAM4_InSilico_Description.pdf
PDF   Reference Manual

Details

biocViews ExperimentData, Genome, Saccharomyces_cerevisiae_Data, SequencingData
Version 1.16.0
License GPL
Depends R (>= 2.15.1), SummarizedExperiment
Imports
LinkingTo
Suggests RUnit, networkBMA
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package DREAM4_1.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/DREAM4
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/DREAM4
Package Short Url http://bioconductor.org/packages/DREAM4/
Package Downloads Report Download Stats

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