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terraTCGAdata

This is the released version of terraTCGAdata; for the devel version, see terraTCGAdata.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15

OpenAccess TCGA Data on Terra as MultiAssayExperiment

DOI: 10.18129/B9.bioc.terraTCGAdata

Bioconductor version: Release (3.23)

Leverage the existing open access TCGA data on Terra with well-established Bioconductor infrastructure. Make use of the Terra data model without learning its complexities. With a few functions, you can copy / download and generate a MultiAssayExperiment from the TCGA example workspaces provided by Terra.

Author: Marcel Ramos [aut, cre] ORCID: 0000-0002-3242-0582

Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>

Citation (from within R, enter citation("terraTCGAdata")):

Marcel Ramos. terraTCGAdata: OpenAccess TCGA Data on Terra as MultiAssayExperiment. doi:10.18129/B9.bioc.terraTCGAdata, R package version 1.16.0, https://bioconductor.org/packages/terraTCGAdata.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("terraTCGAdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("terraTCGAdata")

Details

Package Archives

Follow Installation instructions to use this package in your R session.