BioC 2.2 repos

If you want to mirror the Bioconductor 2.2 repos (the current release verion), please use the following commands:

• All Bioconductor 2.2 repos (approx. size is 39G as of 2008-05-02):

  rsync -rtlv --delete bioconductor.org::2.2 /dest
  
  

• Bioconductor 2.2 Software repo (approx. size is 2.0G as of 2008-05-02):

  rsync -rtlv --delete bioconductor.org::2.2/bioc /dest
  
  

• Bioconductor 2.2 Data repos (approx. size is 37G as of 2008-05-02):

  rsync -rtlv --delete bioconductor.org::2.2/data /dest
  
  

• Bioconductor 2.2 Extra repo (approx. size is 15M as of 2008-05-02):

  rsync -rtlv --delete bioconductor.org::2.2/extra /dest
  
  

BioC 2.3 repos

If you want to mirror the Bioconductor 2.3 repos (the current devel version), please use the following commands:

• All Bioconductor 2.3 repos:

  rsync -rtlv --delete bioconductor.org::2.3 /dest
  
  

• Bioconductor 2.3 Software repo:

  rsync -rtlv --delete bioconductor.org::2.3/bioc /dest
  
  

• Bioconductor 2.3 Data repos:

  rsync -rtlv --delete bioconductor.org::2.3/data /dest
  
  

• Bioconductor 2.3 Extra repo:

  rsync -rtlv --delete bioconductor.org::2.3/extra /dest
  
  

Additional information

It is recommended that package repositories be synced once per day, scheduled with cron.

Begin using your new local repository, by making it accessible on your webserver. See the "contriburl" option to install.packages() (utils) for more information.

Finally, contact us if you would like to have your mirror listed on this page.

The Bioconductor master package repositories reside at Fred Hutchinson Cancer Research Center in Seattle, WA (USA).