DMRcatedata

This is the development version of DMRcatedata; for the stable release version, see DMRcatedata.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

Data Package for DMRcate

Bioconductor version: Development (3.24)

This package contains 9 data objects supporting functionality and examples of the Bioconductor package DMRcate.

Author: Tim Peters

Maintainer: Tim Peters <t.peters at garvan.org.au>

Citation (from within R, enter citation("DMRcatedata")):

Tim Peters. DMRcatedata: Data Package for DMRcate. doi:10.18129/B9.bioc.DMRcatedata, R package version 2.31.0, https://bioconductor.org/packages/DMRcatedata.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("DMRcatedata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DMRcatedata")

The DMRcate package user's guide	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, ExperimentHub, Genome, Homo_sapiens_Data, MicroarrayData, Mus_musculus_Data, SNPData, SequencingData
Version	2.31.0
In Bioconductor since	BioC 2.14 (R-3.1) (12.5 years)
License	GPL-3
Depends	R (>= 4.0), ExperimentHub
Imports	GenomicFeatures, Gviz, readxl, plyr, rtracklayer, IlluminaHumanMethylation450kanno.ilmn12.hg19, IlluminaHumanMethylationEPICanno.ilm10b4.hg19
System Requirements
URL

Suggests	knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	DMRcate
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	DMRcatedata_2.31.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/DMRcatedata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/DMRcatedata
Package Short Url	https://bioconductor.org/packages/DMRcatedata/
Package Downloads Report	Download Stats