AnnotationDbi

Annotation Database Interface

Provides user interface and database connection code for annotation data packages using SQLite data storage.

Author Herve Pages, Marc Carlson, Seth Falcon, Nianhua Li
Maintainer Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("AnnotationDbi")

Vignettes (Documentation)

Package Downloads
AnnotationDbi.pdf
SQLForge.pdf
Package source AnnotationDbi_1.4.2.tar.gz
Windows binary AnnotationDbi_1.4.2.zip
MacOS X 10.4 (Tiger) binary AnnotationDbi_1.4.2.tgz
MacOS X 10.5 (Leopard) binary AnnotationDbi_1.4.2.tgz

Details

biocViews
Annotation , Infrastructure
Depends
R , methods , utils , Biobase
Suggests
DBI , RSQLite , hgu95av2.db , GO.db , human.db0 , mouse.db0 , rat.db0 , fly.db0 , yeast.db0 , arabidopsis.db0 , zebrafish.db0 , ecoliK12.db0 , ecoliSakai.db0
Imports
methods , utils , Biobase , DBI , RSQLite
SystemRequirements
License Artistic-2.0
URL
dependsOnMe
Category , GSEABase , PGSEA , affycoretools , annotate , goProfiles , oligo , ontoTools , pathRender , ppiStats , topGO
suggestsMe
BiocCaseStudies , sigPathway