MBQN

DOI: 10.18129/B9.bioc.MBQN    

Mean/Median-balanced quantile normalization

Bioconductor version: Release (3.10)

Modified quantile normalization for omics or other matrix-like data distorted in location and scale.

Author: Ariane Schad <ariane.schad at fdm.uni-freiburg.de>, Clemens Kreutz <clemens.kreutz at imbi.uni-freiburg.de>, Eva Brombacher <brombach at imbi.uni-freiburg.de>

Maintainer: Ariane Schad <ariane.schad at fdm.uni-freiburg.de>

Citation (from within R, enter citation("MBQN")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBQN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews Normalization, Preprocessing, Proteomics, Software
Version 1.0.0
In Bioconductor since BioC 3.10 (R-3.6) (< 6 months)
License GPL-3 + file LICENSE
Depends R (>= 3.6)
Imports stats, graphics, utils, limma(>= 3.30.13), SummarizedExperiment(>= 1.10.0), preprocessCore(>= 1.36.0), BiocFileCache, rappdirs, rpx
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL https://github.com/arianeschad/mbqn
BugReports https://github.com/arianeschad/MBQN/issues
Depends On Me
Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/MBQN
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MBQN
Package Short Url https://bioconductor.org/packages/MBQN/
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