DOI: 10.18129/B9.bioc.Rhtslib    

HTSlib high-throughput sequencing library as an R package

Bioconductor version: Release (3.7)

This package provides version 1.7 of the 'HTSlib' C library for high-throughput sequence analysis. The package is primarily useful to developers of other R packages who wish to make use of HTSlib. Motivation and instructions for use of this package are in the vignette, vignette(package="Rhtslib", "Rhtslib").

Author: Nathaniel Hayden [led, aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("Rhtslib")):


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HTML R Script Motivation and use of Rhtslib
PDF   Reference Manual
Text   NEWS


biocViews DataImport, Sequencing, Software
Version 1.12.1
In Bioconductor since BioC 3.1 (R-3.2) (3.5 years)
License LGPL (>= 2)
Imports zlibbioc
LinkingTo zlibbioc
Suggests BiocStyle, knitr
URL https://github.com/nhayden/Rhtslib http://www.htslib.org/
BugReports https://github.com/nhayden/Rhtslib
Depends On Me deepSNV
Imports Me csaw, deepSNV, diffHic, scPipe
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rhtslib_1.12.1.tar.gz
Windows Binary Rhtslib_1.12.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) Rhtslib_1.12.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rhtslib
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rhtslib
Package Short Url http://bioconductor.org/packages/Rhtslib/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive

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