To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TurboNorm")

In most cases, you don't need to download the package archive at all.

TurboNorm

A fast scatterplot smoother suitable for microarray normalization

Bioconductor version: Release (2.14)

A fast scatterplot smoother based on B-splines with second-order difference penalty. Functions for microarray normalization of single-colour data i.e. Affymetrix/Illumina and two-colour data supplied as marray MarrayRaw-objects or limma RGList-objects are available.

Author: Maarten van Iterson and Chantal van Leeuwen

Maintainer: Maarten van Iterson <mviterson at gmail.com>

Citation (from within R, enter citation("TurboNorm")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TurboNorm")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TurboNorm")

 

PDF R Script TurboNorm Overview
PDF   Reference Manual
Text   NEWS

Details

biocViews CpGIsland, DNAMethylation, Microarray, OneChannel, Preprocessing, Software, TwoChannel
Version 1.12.0
In Bioconductor since BioC 2.8 (R-2.13)
License LGPL
Depends R (>= 2.12.0), convert, limma(>= 1.7.0), marray
Imports stats, grDevices, affy, lattice
Suggests BiocStyle, affydata
System Requirements
URL http://www.humgen.nl/MicroarrayAnalysisGroup.html
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TurboNorm_1.12.0.tar.gz
Windows Binary TurboNorm_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) TurboNorm_1.12.0.tgz
Mac OS X 10.9 (Mavericks) TurboNorm_1.12.0.tgz
Browse/checkout source (username/password: readonly)
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